Table 2: Candidate target genes with associated binding sites that displayed fold enrichment (FE) values ≥2.


Stage Gene Sequence ddCt FE Function

co-located cye-1 C37A2.4 4.78 27.47 Cell Cycle
co-located F20B6.1 3.84 14.32 Signaling
co-located F29A7.6 3.58 11.96 Cell Cycle
co-located hmg-1.2 F47D12.4 3.39 10.48 Chromatin Regulation
co-located hpl-2 K01G5.2 3.28 9.71 Chromatin Regulation
co-located rpa-2 M04F3.1 3.14 8.82 Cell Cycle
co-located ZC123.4 2.92 7.57 Cell Cycle
co-located zer-1 T24C4.6 2.63 6.19 Cell Cycle
co-located tsp-21 C17G1.8 2.48 5.58 Signaling
co-located jmjd-2 Y48B6A.11 2.44 5.43 Chromatin Regulation
co-located riok-1 M01B12.5 2.39 5.24 Signaling
co-located gei-1 F45H7.2 2.2 4.59 Signaling
co-located zfp-1 F54F2.2 2.19 4.56 Chromatin Regulation
mid L4 Y53F4B.3 2.09 4.26 Cell Division
late L3/ mid L4 ntl-3 Y56A3A.1 2.09 4.26 Gene Regulation
co-located paa-1 F48E8.5 2.03 4.08 Signaling
co-located sipa-1 T27F2.2 1.62 3.07 Signaling
co-located swan-1 F53C11.8 1.59 3.01 Signaling
co-located nck-1 ZK470.5 1.53 2.89 Signaling
co-located eat-16 C16C2.2 1.49 2.81 Signaling
co-located sel-7 K04G11.2 1.46 2.75 Signaling
late L3/ mid L4 snr-4 C52E4.3 1.41 2.66 Splicing
co-located bet-2 F57C7.1 1.39 2.62 Chromatin Regulation
co-located dcp-66 C26C6.5 1.36 2.57 Chromatin Regulation
co-located uaf-2 Y116A8C.35 1.3 2.46 Splicing
mid L4 gex-3 F28D1.10 1.26 2.39 Signaling
co-located bet-1 Y119C1B.8 1.23 2.34 Chromatin Regulation